[1]JI Rui-rui,LIU Ding.Improved gene expression data clustering using a support vector domain description algorithm[J].CAAI Transactions on Intelligent Systems,2009,4(6):544-548.[doi:10.3969/j.issn.1673-4785.2009.06.013]

Improved gene expression data clustering using a support vector domain description algorithm

[1]BEISEN M, SPELLMAN P T, BROWN P O,et al. Cluster analysis and display of genome-wide expression patterns[J]. Proc Natl Acad Sci, 1998,95(12):14863-14868.
[2]P TAMAYO, SLONIM D, MESIROV J, et al. Interpreting patterns of gene expression with self organizing maps[J].Proceedings of National Academy of Sciences,1999,96(6):2907-2912.
[3]SUGIYAMA A, KOTANI M. Analysis of gene expression data by using self-organizing maps and k-means clustering[J]. Neural Network, 2002(5): 1342-1345.
[4]HERRERO J,VALENCIA A, DOPAZO J.A hierarchical unsupervised growing neural network for clustering gene expression patterns[J]. Bioinformatics, 2001:17(2):126-136.
[5]YUNG Y, RUZZO W.An empirical study on principal component analysis for clustering gene expression data[J].Bioinformatics, 2001:17(9):763-774.
[6]BURGES C J C. A tutorial on support vector machines for pattern recognition[J].Data Mining and Knowledge Discovery,1998,2(2):1-47.
[7]WU Fangxiang,ZHANG W J,KUSALIK A J. Dynamic model-based clustering for time-course gene expression data[J]. Journal of Bioinformatics and Computational Biology,2005,3(4):821-836.
[8]JI X L, YUAN Y, LI Y D, SUN Z R. HMMGEP:clustering gene expression data using hidden Markov models[J]. Bioinformatics, 2004, 20(11):1799-1800.
[9]TAX D M J, DUIN R P W. Support vector domain description[J]. Pattern Recognition Letters, 1999,20(11/13):1191-1199.
[10]CERVANTES J, LI Xiaoou, YU Wen, LI Kang. Support vector machine classification for large data sets via minimum enclosing ball clustering[J]. Neurocomputing,2008,71:611-619.
[12]BOSER B E, GUYON I M, VAPNIK V N. A training algorithm for optimal margin classifier[C]//Proc 5th Annu ACM Workshop on Compute Learning Theory. Haussier, Ed,1992:144-152.
[13]YEUNG K Y, HAYNOR D R, RUZZO W L. Validating clustering for gene expression data[J]. Bioinformatics,2001,17(4):309-318.
[14]岳?? 峰, 孙?? 亮,王宽全,王永吉,左旺孟.基因表达数据的聚类分析研究进展[J]. 自动化学报,2008,34(2):113-120.
YUE Feng, SUN Liang, WANG Kuanquan, WANG Yongji, ZUO Wangmeng. State-of-the art of cluster analysis of gene expression data[J].Acta Automatica Sinica,2008,34(2):113-120.
Similar References:



Last Update: 2010-02-22

Copyright © CAAI Transactions on Intelligent Systems